Cytochrome B6-F Complex Iron-Sulfur Subunit

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cytochrome B6-F Complex Iron-Sulfur Subunit
  Conformer 1
(PDB)
2e74 (D)
  Conformer 2
(PDB)
2e76 (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 114 1.11   56 - 174
2 36 0.31   11 - 46

Sequence


           ____________________________________46__________________________________________________________________________________ 
 2e74(D) : DVPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIV-----aIRDYGINAVCTHLGCVVPWNAAENKFKCPC 
         :                                                                                                                          
 2e76(D) : DVPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAV---tTAKDKLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPC 
           ____________________________________46__________________________________________________________________________________ 

           ___________________________________________________                                                                      
 2e74(D) : HGSQYDETGKVIRGPAPLSLALCHATVQDDNIVLTPWTETDFRTGEKPWWV                                                                      
         :                                                                                                                          
 2e76(D) : HGSQYDETGKVIRGPAPLSLALCHATVQDDNIVLTPWTETDFRTGEKPWWV                                                                      
           ___________________________________________________                                                                      

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
17.6
Translation
(A)
0.0
Closure
(%)
99.4
Bending Residues
( green )
  46 - 56
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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