Elongation Factor Tu

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Elongation Factor Tu
  Conformer 1
(PDB)
1aip (A)
  Conformer 2
(PDB)
2c77 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 191 2.63   95 - 98   217 - 403
2 178 2.41   11 - 94   99 - 216

Sequence


           _______________________________________________________________________________82_______________________________________ 
 1aip(A) : *******KPHVNVGTIGHVDHGKTTLTAALTYVTAAENP------------------------tAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHIL 
         :                                                                                                                          
 2c77(A) : KGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHIL 
           _______________________________________________________________________________82_______________________________________ 

           __________________________________________________________________________________________214___________________________ 
 1aip(A) : LARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGR 
         :                                                                                                                          
 2c77(A) : LARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGR 
           __________________________________________________________________________________________214___________________________ 

           ________________________________________________________________________________________________________________________ 
 1aip(A) : IERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEM 
         :                                                                                                                          
 2c77(A) : IERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEM 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________                                                                             
 1aip(A) : VMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE                                                                             
         :                                                                                                                          
 2c77(A) : VMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE                                                                             
           ____________________________________________                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
75.9
Translation
(A)
-6.2
Closure
(%)
97.3
Bending Residues
( green )
  82 - 99
  214 - 217
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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