4-Hydroxy-Tetrahydrodipicolinate Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 4-Hydroxy-Tetrahydrodipicolinate Reductase
  Conformer 1
(PDB) 		4ywj (A)
  Conformer 2
(PDB) 		4ywj (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 146 0.39   3 - 127   240 - 260
2 118 0.23   128 - 239   261 - 266

Sequence


           ________________________________________________________________________________________________________________________ 
 4ywj(A) : MRRIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGADAGELAGLGRIGVPLSGDLGKVCEEFDVLIDFTHPSVTLKNIEQCRKARRAMVIGTTGFSADEKLLLAEAAKDIPI 
         :                                                                                                                          
 4ywj(B) : MRRIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGADAGELAGLGRIGVPLSGDLGKVCEEFDVLIDFTHPSVTLKNIEQCRKARRAMVIGTTGFSADEKLLLAEAAKDIPI 
           ________________________________________________________________________________________________________________________ 

           ____127_________________________________________________________________________________________________________235_____ 
 4ywj(A) : VFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHKVDAPSGTALRMGEVVAQALGRDLQEVAVYGREGQTGARARETIGFATVRAGDVVGDHTVLFAAEGERVEITHKASSRMTF 
         :                                                                                                                          
 4ywj(B) : VFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHKVDAPSGTALRMGEVVAQALGRDLQEVAVYGREGQTGARARETIGFATVRAGDVVGDHTVLFAAEGERVEITHKASSRMTF 
           ____127_________________________________________________________________________________________________________235_____ 

           _________________260________                                                                                             
 4ywj(A) : ARGAVRAALWLEGKENGLYDMQDVLGLR                                                                                             
         :                                                                                                                          
 4ywj(B) : ARGAVRAALWLEGKENGLYDMQDVLGLR                                                                                             
           _________________260________                                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.1
Translation
(A) 		0.2
Closure
(%) 		98.0
Bending Residues
( green ) 		  127 - 129
  235 - 240
  260 - 266
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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