Bai1-Associated Protein 2 Isoform 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bai1-Associated Protein 2 Isoform 1
  Conformer 1
(PDB)
1y2o (B)
  Conformer 2
(PDB)
1y2o (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 181 0.51   5 - 116   119 - 119   122 - 122   125 - 126   175 - 246
2 54 1.41   117 - 118   120 - 121   123 - 124   127 - 174

Sequence


           ____________________________________________________________________________________________________110_________________ 
 1y2o(B) : SLSRSEEhRLTENVYKTIeQFNPSLRNFIAgKNYEKALAGVTYAAKGYFDALVKgELASESQGSKELGDVLFQaEVHRQIQNQLEElKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQ 
         :                                                                                                                          
 1y2o(A) : SLSRSEEhRLTENVYKTIeQFNPSLRNFIAgKNYEKALAGVTYAAKGYFDALVKgELASESQGSKELGDVLFQaEVHRQIQNQLEElKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQ 
           ____________________________________________________________________________________________________110_________________ 

           ____________________________________________174_________________________________________________________________________ 
 1y2o(B) : RSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVSDGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERAVQLqQVA 
         :                                                                                                                          
 1y2o(A) : RSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVSDGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERAVQLqQVA 
           ____________________________________________174_________________________________________________________________________ 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.7
Translation
(A)
-0.3
Closure
(%)
98.3
Bending Residues
( green )
  110 - 127
  174 - 175
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download