Cg9211-Pa

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cg9211-Pa
  Conformer 1
(PDB)
2ibb (A)
  Conformer 2
(PDB)
2ibg (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 106 0.76   502 - 504   514 - 514   536 - 537   540 - 546   577 - 674
2 98 0.71   466 - 501   505 - 513   515 - 535   538 - 539   547 - 576

Sequence


           ___________________________________501_________513___________________535________546________________________573__________ 
 2ibb(A) : STYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPE 
         :                                                                                                                          
 2ibg(B) : STYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPE 
           ___________________________________501_________513___________________535________546________________________573__________ 

           _____________________________________________________________________________________________                            
 2ibb(A) : LLEIEEYSETAVVLHWSLA-----hLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRP                            
         :                                                                                                                          
 2ibg(B) : LLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRP                            
           _____________________________________________________________________________________________                            

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.4
Translation
(A)
-0.1
Closure
(%)
14.9
Bending Residues
( green )
  501 - 502
  504 - 505
  513 - 515
  535 - 540
  546 - 547
  573 - 578
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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