Hemin Transport Protein Hems

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hemin Transport Protein Hems
  Conformer 1
(PDB)
2j0r (A)
  Conformer 2
(PDB)
2j0p (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 166 0.69   6 - 74   76 - 96   100 - 167   247 - 254
2 158 0.77   75 - 75   97 - 99   168 - 246   255 - 339

Sequence


           ______________________________________________________________________74____________________96_99_______________________ 
 2j0r(A) : KSIYEQYLQAKADNPGKYARDLATLMGISEAELTHSRVSHDAKRLKGDARALLAALEAVGEVKAITRNTYAVHEQMGRYENQHLNGHAGLILNPRNLDLRLFLNQWASAFTLTEETRHGV 
         :                                                                                                                          
 2j0p(A) : *SIYEQYLQAKADNPGKYARDLATLMGISEAELTHSRVSHDAKRLKGDARALLAALEAVGEVKAITRNTYAVHEQMGRYENQHLNGHAGLILNPRNLDLRLFLNQWASAFTLTEETRHGV 
           ______________________________________________________________________74____________________96_99_______________________ 

           __________________________________________167____________________________________________________________________246____ 
 2j0r(A) : RHSIQFFDHQGDALHKVYVTEQTDMPAWEALLAQFITTENPELQLEPLSaTDEAVDAEWRAMTDVHQFFQLLKRNNLTRQQAFRAVGNDLAYQVDNSSLTQLLNIAQQEQNEIMIFVGNR 
         :                                                                                                                          
 2j0p(A) : RHSIQFFDHQGDALHKVYVTEQTDMPAWEALLAQFITTENPELQLEP--aTDEAVDAEWRAMTDVHEFFQLLKRNNLTRQQAFRAVGNDLAYQVDNSSLTQLLNIAQQEQNEIMIFVGNR 
           __________________________________________167____________________________________________________________________246____ 

           _254_______________________________________________________________________________________                              
 2j0r(A) : GCVQIFTGMIEKVTPHQDWINVFNQRFTLHLIETTIAESWITRKPTKDGFVTSLELFAADGTQIAQLYGQRTEGQPEQTQWRDQIARLNNK                              
         :                                                                                                                          
 2j0p(A) : GCVQIFTGMIEKVTPHQDWINVFNQRFTLHLIETTIAESWITRKPTKDGFVTSLELFAADGTQIAQLYGQRTEGQPEQTQWRDQIARLNNK                              
           _254_______________________________________________________________________________________                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.9
Translation
(A)
0.1
Closure
(%)
88.5
Bending Residues
( green )
  74 - 76
  96 - 97
  99 - 100
  167 - 182
  246 - 247
  254 - 255
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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