Invertase/pectin Methylesterase Inhibitor Family Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Invertase/pectin Methylesterase Inhibitor Family Protein
  Conformer 1
(PDB)
1x91 (A)
  Conformer 2
(PDB)
1x90 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 121 1.36   27 - 147
2 22 1.92   5 - 26

Sequence


           _______________________25_______________________________________________________________________________________________ 
 1x91(A) : SSEMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRS 
         :                                                                                                                          
 1x90(B) : **EMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRS 
           _______________________25_______________________________________________________________________________________________ 

           _____________________________                                                                                            
 1x91(A) : VDSSVVNNSKTIKNLCGIALVISNMLPRN                                                                                            
         :                                                                                                                          
 1x90(B) : VDSSVVNNSKTIKNLCGIALVISNMLPRN                                                                                            
           _____________________________                                                                                            

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
124.1
Translation
(A)
1.2
Closure
(%)
26.9
Bending Residues
( green )
  25 - 30
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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