Acetylglutamate Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Acetylglutamate Kinase
  Conformer 1
(PDB)
2ap9 (D)
  Conformer 2
(PDB)
2ap9 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 234 1.17   8 - 220   227 - 231   269 - 290
2 45 1.4   221 - 226   232 - 268   291 - 293

Sequence


           ________________________________________________________________________________________________________________________ 
 2ap9(D) : IEALPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAtDDTLRRAFAADaFLRNCGIHPVVVHGGGPQITAlRRLGIEGDFKGGFRVTTPEVLDVARvLFGQVGRELVNLINAHGPYAVGI 
         :                                                                                                                          
 2ap9(A) : IEALPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAtDDTLRRAFAADaFLRNCGIHPVVVHGGGPQITAlRRLGIEGDFKGGFRVTTPEVLDVARvLFGQVGRELVNLINAHGPYAVGI 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________220_______________________________ 
 2ap9(D) : TGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAlDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLlTDIDGLYTRWPDRDSLVSEIDTGTLAQLLPTLELGvP 
         :                                                                                                                          
 2ap9(A) : TGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAlDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLlTDIDGLYTRWPDRDSLVSEIDTGTLAQLLPTLELGvP 
           ______________________________________________________________________________________220_______________________________ 

           _____________268___________________290______________                                                                     
 2ap9(D) : KVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRGE*******                                                                     
         :                                                                                                                          
 2ap9(A) : KVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRGEGHHHHHH                                                                     
           _____________268___________________290______________                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.6
Translation
(A)
0.1
Closure
(%)
28.1
Bending Residues
( green )
  220 - 232
  268 - 269
  290 - 292
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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