Biotin--[acetyl-Coa-Carboxylase] Ligase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Biotin--[acetyl-Coa-Carboxylase] Ligase
  Conformer 1
(PDB)
1wq7 (B)
  Conformer 2
(PDB)
2dxu (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 158 0.66   6 - 171
2 58 0.74   172 - 233

Sequence


           ________________________________________________________________________________________________________________________ 
 1wq7(B) : MLGLKTSIIGRRVIYFQEITSTNEFAKTSYLEEGTVIVADKQTMG--------eSPEGGLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSIDGRIKWPNDVLVNYKKIAGVLVEGK 
         :                                                                                                                          
 2dxu(A) : MLGLKTSIIGRRVIYFQEITSTNEFAKTSYLEEGTVIVADKQTMGHGALNRKWESPEGGLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSIDGRIKWPNDVLVNYKKIAGVLVEGK 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________171________________________________________________________________      
 1wq7(B) : GDKIVLGIGLNVNNKVPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL      
         :                                                                                                                          
 2dxu(A) : GDKIVLGIGLNVNNKVPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKI----sFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL      
           ________________________________________________171________________________________________________________________      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.8
Translation
(A)
0.2
Closure
(%)
96.9
Bending Residues
( green )
  171 - 172
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download