Gtpase Hras

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Gtpase Hras
  Conformer 1
(PDB)
2ce2 (X)
  Conformer 2
(PDB)
1nvv (R)
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 131 2.4   7 - 22   46 - 160
2 23 3.88   23 - 45

Sequence


           ____________________22_____________________45___________________________________________________________________________ 
 2ce2(X) : MTEYKLVVVGAGGVGKSALTIQLIQNHFVDECDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKSDL 
         :                                                                                                                          
 1nvv(R) : MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL 
           ____________________22_____________________45___________________________________________________________________________ 

           ______________________________________________                                                                           
 2ce2(X) : AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH                                                                           
         :                                                                                                                          
 1nvv(R) : AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH                                                                           
           ______________________________________________                                                                           

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
38.0
Translation
(A)
-0.7
Closure
(%)
98.9
Bending Residues
( green )
  22 - 23
  45 - 46
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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