Molybdopterin Biosynthesis Protein Moea

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Molybdopterin Biosynthesis Protein Moea
  Conformer 1
(PDB) 		2nqq (A)
  Conformer 2
(PDB) 		1fc5 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 309 1.08   9 - 52   140 - 406
2 83 0.49   53 - 139

Sequence


           ____________________________________________52__________________________________________________________________________ 
 2nqq(A) : LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRF 
         :                                                                                                                          
 1fc5(B) : GLsLDTALNE-lSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSA-dGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRI-tGAPVPEGCEAVV-qEQTEQ-dNGVRF 
           ____________________________________________52__________________________________________________________________________ 

           __________139___________________________________________________________________________________________________________ 
 2nqq(A) : TAEVRSGQNIQRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADV 
         :                                                                                                                          
 1fc5(B) : TAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHL-lEQLGCEVINLGIIRDDPHALRAAFIEADSQADV 
           __________139___________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2nqq(A) : VISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTT 
         :                                                                                                                          
 1fc5(B) : VISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTT 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________                                                                              
 2nqq(A) : GHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG                                                                              
         :                                                                                                                          
 1fc5(B) : GHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALF*                                                                              
           ___________________________________________                                                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		16.9
Translation
(A) 		0.7
Closure
(%) 		44.7
Bending Residues
( green ) 		  52 - 54
  139 - 141
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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