Neurotrophic Factor Artemin, Isoform 3

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Neurotrophic Factor Artemin, Isoform 3
  Conformer 1
(PDB)
2gyr (D)
  Conformer 2
(PDB)
2gh0 (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 66 0.68   6 - 37   65 - 98
2 27 0.76   38 - 64

Sequence


           _________________________________37_________________________64_____________________________________                      
 2gyr(D) : *GCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATACGC*                      
         :                                                                                                                          
 2gh0(D) : PGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATACGCL                      
           ________________________________155________________________182_____________________________________                      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
15.9
Translation
(A)
0.0
Closure
(%)
77.5
Bending Residues
( green )
  37 - 42
  64 - 67
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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