Non-Toxin Haemagglutinin Ha34

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Non-Toxin Haemagglutinin Ha34
  Conformer 1
(PDB) 		1ybi (B)
  Conformer 2
(PDB) 		1ybi (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 142 0.94   150 - 291
2 138 0.58   12 - 149

Sequence


           ________________________________________________________________________________________________________________________ 
 1ybi(B) : SLNDKIVTISCKADTNLFFYQVAGNVSLFQQTRNYLERWRLIYDSNKAAYKIKSMDIHNTNLVLTWNAPTHNISTQQDSNADNQYWLLLKDIGNNSFIIASYKNPNLVLYADTVARNLKL 
         :                                                                                                                          
 1ybi(A) : SLNDKIVTISCKADTNLFFYQVAGNVSLFQQTRNYLERWRLIYDSNKAAYKIKSMDIHNTNLVLTWNAPTHNISTQQDSNADNQYWLLLKDIGNNSFIIASYKNPNLVLYADTVARNLKL 
           ________________________________________________________________________________________________________________________ 

           _________________149____________________________________________________________________________________________________ 
 1ybi(B) : STLNNSNYIKFIIEDYIISDLNNFTCKISPILDLNKVVQQVDVTNLNVNLYTWDYGRNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFSNGNTVRVSSSNDQNNDAQYWLINPVSDTDET 
         :                                                                                                                          
 1ybi(A) : STLNNSNYIKFIIEDYIISDLNNFTCKISPILDLNKVVQQVDVTNLNVNLYTWDYGRNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFSNGNTVRVSSSNDQNNDAQYWLINPVSDTDET 
           _________________149____________________________________________________________________________________________________ 

           ____________________________________________                                                                             
 1ybi(B) : YTITNLRDTTKALDLYGGQTANGTAIQVFNYHGDDNQKWNIRNP                                                                             
         :                                                                                                                          
 1ybi(A) : YTITNLRDTTKALDLYGGQTANGTAIQVFNYHGDDNQKWNIRNP                                                                             
           ____________________________________________                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		18.7
Translation
(A) 		0.0
Closure
(%) 		81.8
Bending Residues
( green ) 		  149 - 150
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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