O-Acetylserine Sulfhydrylase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name O-Acetylserine Sulfhydrylase
  Conformer 1
(PDB) 		1d6s (A)
  Conformer 2
(PDB) 		1fcj (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 227 0.48   3 - 59   72 - 80   139 - 299
2 70 1.06   60 - 71   81 - 138

Sequence


           ________________________________________________50______________66_________77___________________________________________ 
 1d6s(A) : SKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVACRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMK 
         :                                                                                                                          
 1fcj(B) : SKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMK 
           ________________________________________________50______________66_________77___________________________________________ 

           _______________138______________________________________________________________________________________________________ 
 1d6s(A) : GAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDL 
         :                                                                                                                          
 1fcj(B) : GAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDL 
           _______________138______________________________________________________________________________________________________ 

           __________________________________________________________________________________                                       
 1d6s(A) : KLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ                                       
         :                                                                                                                          
 1fcj(B) : KLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGER******************                                       
           __________________________________________________________________________________                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		17.2
Translation
(A) 		-0.2
Closure
(%) 		98.0
Bending Residues
( green ) 		  50 - 60
  66 - 72
  77 - 81
  138 - 140
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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