Organic Hydroperoxide Resistance Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Organic Hydroperoxide Resistance Transcriptional Regulator
  Conformer 1
(PDB) 		1z91 (A)
  Conformer 2
(PDB) 		1z9c (C)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 64 0.55   30 - 58   84 - 118
2 30 0.51   11 - 29   131 - 141
3 25 0.54   59 - 83

Sequence


           _____________________29_________________________56_________________________83_______________________________117_________ 
 1z91(A) : *MKLENQLSFLLYASSREMTKQYKPLLDKLNITYPQYLALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKAVDIPGTILGLSKQSG 
         :                                                                                                                          
 1z9c(C) : HMKLENQLSFLLYASSREMTKQYKPLLDKLNITYPQYLALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKAVDIPGTILGLSKQSG 
           _____________________29_________________________56_________________________83_______________________________117_________ 

           __________________                                                                                                       
 1z91(A) : EDLKQLKSALYTLLETLH                                                                                                       
         :                                                                                                                          
 1z9c(C) : EDLKQLKSALYTLLETLH                                                                                                       
           __________________                                                                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.0
Translation
(A) 		0.3
Closure
(%) 		44.1
Bending Residues
( green ) 		  29 - 30
  117 - 131
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		10.5
Translation
(A) 		0.2
Closure
(%) 		100.0
Bending Residues
( green ) 		  56 - 59
  83 - 84
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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