Pantothenate Kinase 3

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Pantothenate Kinase 3
  Conformer 1
(PDB) 		2i7p (A)
  Conformer 2
(PDB) 		2i7p (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 224 0.38   16 - 17   65 - 65   137 - 360   363 - 363
2 116 0.53   14 - 15   18 - 64   66 - 136   361 - 362

Sequence


           _______15_______________________________________62______________________________________________________________________ 
 2i7p(A) : VPRGSPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNtGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNL 
         :                                                                                                                          
 2i7p(D) : *****PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSN-gIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNL 
           _______15_______________________________________62______________________________________________________________________ 

           __136___________________________________________________________________________________________________________________ 
 2i7p(A) : HLHKLDELDCLVKGLLYIDSV----qAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVR 
         :                                                                                                                          
 2i7p(D) : HLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVR 
           __136___________________________________________________________________________________________________________________ 

           __________________________________________________________________________________________________________360________    
 2i7p(A) : DIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPN    
         :                                                                                                                          
 2i7p(D) : DIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLG***    
           __________________________________________________________________________________________________________360________    

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		9.3
Translation
(A) 		0.1
Closure
(%) 		88.3
Bending Residues
( green ) 		  15 - 18
  62 - 66
  136 - 137
  360 - 363
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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