Phosphonoacetaldehyde Hydrolase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphonoacetaldehyde Hydrolase
  Conformer 1
(PDB) 		1swv (A)
  Conformer 2
(PDB) 		1rdf (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 186 1.1   7 - 24   51 - 54   96 - 259
2 67 0.72   25 - 50   55 - 95

Sequence


           __________________24________________________50_______________________________________91_________________________________ 
 1swv(A) : KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGS 
         :                                                                                                                          
 1rdf(A) : KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMPLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGS 
           __________________24________________________50_______________________________________91_________________________________ 

           ________________________________________________________________________________________________________________________ 
 1swv(A) : TTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 
         :                                                                                                                          
 1rdf(A) : TTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 
           ________________________________________________________________________________________________________________________ 

           _______________________                                                                                                  
 1swv(A) : TIETMQELESVMEHIEK******                                                                                                  
         :                                                                                                                          
 1rdf(A) : TIETMQELESVMEHIEKQELIIS                                                                                                  
           _______________________                                                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		33.3
Translation
(A) 		1.6
Closure
(%) 		95.2
Bending Residues
( green ) 		  24 - 26
  50 - 55
  91 - 99
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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