Possible Transcriptional Regulator, Arsr Family Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Possible Transcriptional Regulator, Arsr Family Protein
  Conformer 1
(PDB)
2oqg (B)
  Conformer 2
(PDB)
2oqg (C)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 51 0.49   12 - 62
2 30 0.91   63 - 92

Sequence


           __________________________________________________________61_______________________________________________              
 2oqg(B) : TVGTYAELASVFAALSDETRWEILTELGRADQSASSLATRLPVSRQAIAKHLNALQACGLVESVKVGREIRYRALGAELNKTARTLERIGAEWDRRLAAIKQIAESe              
         :                                                                                                                          
 2oqg(C) : *VGTYAELASVFAALSDETRWEILTELGRADQSASSLATRLPVSRQAIAKHLNALQACGLVESVKVGREIRYRALGAELNKTARTLERIGAEWDRRLAAIKQIAES*              
           __________________________________________________________61_______________________________________________              

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.8
Translation
(A)
0.4
Closure
(%)
52.6
Bending Residues
( green )
  61 - 65
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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