Scytalidopepsin B

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Scytalidopepsin B
  Conformer 1
(PDB)
2ifw (A)
  Conformer 2
(PDB)
2ifr (A)
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 163 0.79   7 - 135   154 - 181   193 - 200
2 29 0.88   136 - 153   182 - 192

Sequence


           ________________________________________________________________________________________________________________________ 
 2ifw(A) : TVESNWGGAILIGSDFDTVSATANVPSASGGSSAAGTAWVGIDGDTCQTAILQTGFDWYGDGTYDAWYEWYPEVSDDFSGITISEGDSIQMSVTATSDTSGSATLENLTTGQKVSKSFSN 
         :                                                                                                                          
 2ifr(A) : TVESNWGGAILIGSDFDTVSATANVPSASGGSSAAGTAWVGIDGDTCQTAILQTGFDWYGDGTYDAWYEWYPEVSDDF--iTISEGDSIQMSVTATSDTSGSATLENLTTGQKVSKSFSN 
           ________________________________________________________________________________________________________________________ 

           ____________135_______________153_________________________181________192______________                                   
 2ifw(A) : ESSGSLCRTNAEFIIEDFEECNSNGSDCEFVPFASFSPAVEFTDCSVTSDGESVSLDDAQITQVIINNQDVTDCSVSGTTVSCSYV                                   
         :                                                                                                                          
 2ifr(A) : ESSGSLCRTNAEFIIEDFEECNSNGSDCEFVPFASFSPAVEFTDCSVTSDGESVSLDDAQITQVIINNQDVTDCSVSGTTVSCSYV                                   
           ____________135_______________153_________________________181________192______________                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.5
Translation
(A)
-0.1
Closure
(%)
98.8
Bending Residues
( green )
  135 - 136
  153 - 155
  181 - 183
  192 - 194
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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