Serine/threonine-Protein Kinase 16

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Serine/threonine-Protein Kinase 16
  Conformer 1
(PDB)
2buj (A)
  Conformer 2
(PDB)
2buj (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 191 0.68   71 - 77   100 - 165   171 - 292
2 85 0.57   7 - 70   78 - 99   166 - 170

Sequence


           _________________________________________________________________70_____77____________________99________________________ 
 2buj(A) : *NLYFQGHMVIIDNKHYLFIQKLGE--fSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED 
         :                                                                                                                          
 2buj(B) : ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE----hEAWLLLPFFKRGTLWNEIERLKDKGNFLTED 
           _________________________________________________________________70_____77____________________99________________________ 

           _______________________________________165______________________________________________________________________________ 
 2buj(A) : QILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 
         :                                                                                                                          
 2buj(B) : QILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 
           _______________________________________165______________________________________________________________________________ 

           ______________________________________________________                                                                   
 2buj(A) : SVALAVQNQiPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG                                                                   
         :                                                                                                                          
 2buj(B) : SVALAVQNQL--sPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA**                                                                   
           ______________________________________________________                                                                   

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.3
Translation
(A)
0.5
Closure
(%)
43.5
Bending Residues
( green )
  70 - 71
  77 - 78
  99 - 103
  165 - 175
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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