Slam Family Member 6

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Slam Family Member 6
  Conformer 1
(PDB) 		2if7 (B)
  Conformer 2
(PDB) 		2if7 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 108 1.11   5 - 106   177 - 182
2 76 1.53   107 - 176   183 - 191

Sequence


           _____________________________________________________________________________________________________106________________ 
 2if7(B) : LTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQN 
         :                                                                                                                          
 2if7(A) : LTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSq---N 
           _____________________________________________________________________________________________________106________________ 

           ___________________________________________________176___182___________                                                  
 2if7(B) : MTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCE                                                  
         :                                                                                                                          
 2if7(A) : MTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCE                                                  
           ___________________________________________________176___182___________                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		22.3
Translation
(A) 		0.4
Closure
(%) 		17.7
Bending Residues
( green ) 		  106 - 107
  176 - 177
  182 - 183
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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