Soluble Inorganic Pyrophosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Soluble Inorganic Pyrophosphatase
  Conformer 1
(PDB) 		1faj  
  Conformer 2
(PDB) 		1mjy (B)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 128 0.58   6 - 20   51 - 168
2 30 0.89   21 - 50

Sequence


           __________________20____________________________50______________________________________________________________________ 
 1faj    : SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTD--gEDAKLVAVPHSKLSKEYDHI 
         :                                                                                                                          
 1mjy(B) : SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVNVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHI 
           __________________20____________________________50______________________________________________________________________ 

           _______________________________________________________                                                                  
 1faj    : KDVNDLPELLKAQIAHFFEHYKDLE---wVKVEGWENAEAAKAEIVASFERAK**                                                                  
         :                                                                                                                          
 1mjy(B) : KDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKNK                                                                  
           _______________________________________________________                                                                  

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.7
Translation
(A) 		0.5
Closure
(%) 		70.1
Bending Residues
( green ) 		  20 - 21
  50 - 52
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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