Son Of Sevenless Protein Homolog 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Son Of Sevenless Protein Homolog 1
  Conformer 1
(PDB)
1xdv (B)
  Conformer 2
(PDB)
1xd4 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 638 1.56   202 - 420   550 - 1042
2 117 0.4   421 - 549

Sequence


           ________________________________________________________________________________________________________________________ 
 1xdv(B) : **TYYDLVKAFMAEIRQYIRELNLIIKVFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPHPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSK 
         :                                                                                                                          
 1xd4(B) : EQTYYDLVKAFMAEIRQYIRELNLIIKVFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPHPLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSK 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________419________________________________ 
 1xdv(B) : PGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQLEEKSEDQEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESA-iKKMNEIQKNIDGWEGKDIGQCCNEFIMEGTL 
         :                                                                                                                          
 1xd4(B) : PGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQLEEKSEDQEDKECLKQAITALLNVQSGMEKICSKSLAKRRLSESAaIKKMNEIQKNIDGWEGKDIGQCCNEFIMEGTL 
           _____________________________________________________________________________________419________________________________ 

           __________________________________________________________________________________________543___________________________ 
 1xdv(B) : TRVGAKHERHIFLFDGLMICCKSN------------eYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYRSTL-----------------rLP 
         :                                                                                                                          
 1xd4(B) : TRVGAKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYRSTLERMLDVTMLQEEKEEQMRLP 
           __________________________________________________________________________________________543___________________________ 

           ________________________________________________________________________________________________________________________ 
 1xdv(B) : SADVYRFAEPDSEENIIFEEgIPIIKAGTVIKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLIIERFEIPEP----------------------rFRKEYIQPVQLRVLNVCRHW 
         :                                                                                                                          
 1xd4(B) : SADVYRFAEPDSEENIIFEEgIPIIKAGTVIKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLIIERFEIPEPEPTEADRIAIENGDQPLSAELKRFRKEYIQPVQLRVLNVCRHW 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1xdv(B) : VEHHFYDFERDAYLLQRMEEFIGTVRGKAMKKWVESITKIIQRKK---------sPPTVEWHISRPGHIETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEINSPNLL 
         :                                                                                                                          
 1xd4(B) : VEHHFYDFERDAYLLQRMEEFIGTVRGKAMKKWVESITKIIQRKKIAhNITFQSSPPTVEWHISRPGHIETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEINSPNLL 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1xdv(B) : KMIRHTTNLTLWFEKCIVETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTEE 
         :                                                                                                                          
 1xd4(B) : KMIRHTTNLTLWFEKCIVETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTEE 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________                 
 1xdv(B) : GNPEVLKRHGKELINFSKRRKVAEITGEIQQYQNQPYCLRVESDIKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRNPKPLPRFPKKYSYPLKSPGVRPSN**                 
         :                                                                                                                          
 1xd4(B) : GNPEVLKRHGKELINFSKRRKVAEITGEIQQYQNQPYCLRVESDIKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRNPKPLPRFPKKYSYPLKSPGVRPSNPR                 
           ________________________________________________________________________________________________________                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.5
Translation
(A)
-1.8
Closure
(%)
90.8
Bending Residues
( green )
  419 - 421
  543 - 578
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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