Sorcin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sorcin
  Conformer 1
(PDB) 		1juo (B)
  Conformer 2
(PDB) 		1juo (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 121 1.07   29 - 127   138 - 145   149 - 162
2 47 0.95   128 - 137   146 - 148   163 - 196

Sequence


           __________________________________________________________________________________________________127____134________145_ 
 1juo(B) : FPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 
         :                                                                                                                          
 1juo(A) : FPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 
           __________________________________________________________________________________________________127____134________145_ 

           _____________162____________________________________                                                                     
 1juo(B) : RYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV                                                                     
         :                                                                                                                          
 1juo(A) : RYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV                                                                     
           _____________162____________________________________                                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.3
Translation
(A) 		0.3
Closure
(%) 		99.8
Bending Residues
( green ) 		  127 - 128
  134 - 140
  145 - 146
  148 - 149
  162 - 163
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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