Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Transcriptional Regulator
  Conformer 1
(PDB) 		2g7u (B)
  Conformer 2
(PDB) 		2g7u (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 167 0.68   83 - 253
2 72 0.3   11 - 82

Sequence


           ___________________________________________________________________________82___________________________________________ 
 2g7u(B) : RDYIQSIERGFAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGSGGRWSLTPRVLSIGQHYSESHALIEAApRLLEVAEKTQESASLGVLDGADVVYAARVPVRRIsI 
         :                                                                                                                          
 2g7u(D) : ***IQSIERGFAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGSGGRWSLTPRVLSIGQHYSESHALIEAApRLLEVAEKTQESASLGVLDGADVVYAARVPVRRIsI 
           ___________________________________________________________________________82___________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2g7u(B) : NVSVGTRVPAYATSgRALLAWAPADVVERVVAESTFQKLGPETIGTAAELERELAKVREQGFALTSEELEKGLISLAAPVHDAGGTVVGVVACSTSSARNTPAQFREQAVPCVLAAAAAL 
         :                                                                                                                          
 2g7u(D) : NVSVGTRVPAYATSgRALLAWAPADVVERVVAESTFQKLGPETIGTAAELERELAKVREQGFALTSEELEKGLISLAAPVHDAGGTVVGVVACSTSSARNTPAQFREQAVPCVLAAAAAL 
           ________________________________________________________________________________________________________________________ 

           _______                                                                                                                  
 2g7u(B) : SADgFA*                                                                                                                  
         :                                                                                                                          
 2g7u(D) : SADgFAG                                                                                                                  
           _______                                                                                                                  

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.8
Translation
(A) 		-0.4
Closure
(%) 		90.5
Bending Residues
( green ) 		  82 - 83
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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