Udp-N-Acetylglucosamine Pyrophosphorylase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-N-Acetylglucosamine Pyrophosphorylase
  Conformer 1
(PDB) 		1fwy (B)
  Conformer 2
(PDB) 		1fxj (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 193 0.52   5 - 15   38 - 65   69 - 101   107 - 227
2 127 0.42   16 - 37   66 - 68   102 - 106   228 - 324

Sequence


           ___________15_________________34_____________________________65_________________________________101_105_________________ 
 1fwy(B) : NNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKP 
         :                                                                                                                          
 1fxj(A) : NNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKP 
           ___________15_________________34_____________________________65_________________________________101_105_________________ 

           ______________________________________________________________________________________________________227_______________ 
 1fwy(B) : QGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSE 
         :                                                                                                                          
 1fxj(A) : QGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSE 
           ______________________________________________________________________________________________________227_______________ 

           _______________________________________________________________________________________                                  
 1fwy(B) : QAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTI***                                  
         :                                                                                                                          
 1fxj(A) : QAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGPF                                  
           _______________________________________________________________________________________                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		6.7
Translation
(A) 		0.0
Closure
(%) 		62.3
Bending Residues
( green ) 		  15 - 16
  34 - 38
  65 - 69
  101 - 102
  105 - 107
  227 - 228
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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