Yuso Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Yuso Protein
  Conformer 1
(PDB)
1s3j (A)
  Conformer 2
(PDB)
1s3j (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 85 0.68   27 - 114
2 44 0.79   5 - 25   115 - 140

Sequence


           ____________________24___________________________________________________________________________________114____________ 
 1s3j(A) : *SADQLsDIQLSLQALFQKIQPElESeKQGVTPAQLFVLASLKKHGSLKVSEIAEReVKPSAVTLaDRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFEEVLAGRKAIaRYLSFLTEEE 
         :                                                                                                                          
 1s3j(B) : KSADQLsDIQLSLQALFQKIQPElESeKQGVTPAQLFVLASLKKHGSLKVSEIAEReVKPSAVTLaDRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFEEVLAGRKAIaRYLSFLTEEE 
           ____________________24___________________________________________________________________________________114____________ 

           _________________                                                                                                        
 1s3j(A) : lQAAHITAKLAQAAETD                                                                                                        
         :                                                                                                                          
 1s3j(B) : lQAAHITAKLAQAA***                                                                                                        
           _________________                                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
18.3
Translation
(A)
1.0
Closure
(%)
95.3
Bending Residues
( green )
  24 - 27
  114 - 115
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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