beta-phosphoglucomutase
Ligand-induced domain movement details

Jmol view of liganded conformation 2

Domain Movement

domain 1 is binding domain(fixed in space) domain 2 is binding domain(fixed in space)

Sequence


           ____________14____________________________________ 
 1lvh(B) : MFKAVLF-lDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSRE 
         :                                                    
 1z4o(B) : MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSRE 
           ____________14____________________________________ 

           ______________________________82__________________ 
 1lvh(B) : DSLQKILDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLL 
         :                                                    
 1z4o(B) : DSLQKILDLADK----eEFKELAKRKNDNYVKMIQDVSPADVYPGILQLL 
           ______________________________82__________________ 

           __________________________________________________ 
 1lvh(B) : KDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDI 
         :                                                    
 1z4o(B) : KDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDI 
           __________________________________________________ 

           __________________________________________________ 
 1lvh(B) : FIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVI 
         :                                                    
 1z4o(B) : FIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVI 
           __________________________________________________ 

           _____________________                              
 1lvh(B) : VPDTSHYTLEFLKEVWLQKQK                              
         :                                                    
 1z4o(B) : VPDTSHYTLEFLKEVWLQK**                              
           _____________________                              

Details

  Property   Value
 Conformer 1 1lvh(B)
 Conformer 2 1z4o(B)
 Radius gyration for conformer 1 18.57 A
 Radius gyration for conformer 2 17.4 A
 EC Number 5.4.2.6  
Click here to see the DynDom results or the famliy
 Trigger ligands GL11221
 Trigger ligands in which conformation Conformation  2
 Conformaton with trigger ligands is compact Yes
 Spanning ligands Yes
 Residues in enzyme contacting ligands ALA115  ARG49  ASN118  GLY46  HIS20  LEU44  LYS117  LYS76  SER114  SER116  SER48  TRP24  VAL47 
 Residues in extended bending regions contacting ligands Null
 Residues in extended bending regions making H-bonds or salt-bridges with ligands Null
  Residues in extended bending regions with an H-bond between its main chain and ligands Null
Click here to see the details of H-bonds between ligands and enzyme in PDF format generated by LIGPLOT