DNA-directed RNA polymerase beta chain

Protein Family Details

  Property   Value
 Name DNA-directed RNA polymerase beta chain
Family ID 25_m
First Chain 2be5 (M)
  No of Chains 26
  No of Clusters 8
  No of Rep. Chains 17
  No of Dimensions 7
No of Domain Movements 4

Clusters

Cluster ID Diameter (A) No of Chains Representative Members
1 0.0 1 2gho(C) 2gho(C) 
2 0.0 1 1l9z(C) 1l9z(C) 
3 0.0 2 1l9u(C) 1l9u(C)  1l9u(L) 
4 0.27 5 2a6h(C) 2a68(C)  2a69(C)  2a6e(C)  2a6h(C)  2be5(C) 
5 0.28 3 1iw7(M) 1iw7(M)  1zyr(M)  2cw0(M) 
6 0.32 2 1i6v(C) 1hqm(C)  1i6v(C) 
7 0.73 10 Extended 1iw7(C)  1smy(C)  1smy(M)  1zyr(C)  2a68(M)  2a69(M)  2a6e(M)  2a6h(M)  2be5(M)  2cw0(C) 
8 0.46 2 1ynj(C) 1ynj(C)  1ynn(C) 

Dimensions

Dimension ID Chain 1 Chain 2 Dyndom Run
1 (Vector: v1) 1i6v (C) 2be5 (M) true
2 (Vector: v2) 1i6v (C) 2gho (C) true
3 (Vector: v3) 1i6v (C) 1l9u (C) false
4 (Vector: v4) 1i6v (C) 1ynj (C) true
5 (Vector: v5) 2be5 (M) 2a6h (C) false
6 (Vector: v6) 2be5 (M) 1iw7 (M) true
7 (Vector: v7) 2be5 (M) 1smy (M) false

Associated Chains for 1-dimension

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
2a69 (M) DNA-directed RNA polymerase beta chain 1119 2.5 7 0.96v1
2a68 (M) DNA-directed RNA polymerase beta chain 1119 2.5 7 0.98v1
2a6e (M) DNA-directed RNA polymerase beta chain 1119 2.8 7 0.99v1
2a6h (M) DNA-directed RNA polymerase beta chain 1119 2.4 7 0.97v1
2be5 (M) DNA-directed RNA polymerase beta chain 1119 2.4 7 1.0v1
1i6v (C) DNA-DIRECTED RNA POLYMERASE 1113 3.3 6 0

Associated Chains for 2-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
2gho (C) DNA-directed RNA polymerase beta chain 1114 5 1 1.0v2
1i6v (C) DNA-DIRECTED RNA POLYMERASE 1113 3.3 6 0

Associated Chains for 3-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1l9u (C) RNA POLYMERASE, BETA SUBUNIT 1084 4 3 1.0v3
1i6v (C) DNA-DIRECTED RNA POLYMERASE 1113 3.3 6 0

Associated Chains for 4-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1ynj (C) DNA-directed RNA polymerase beta chain 1114 3.2 8 1.0v4
1i6v (C) DNA-DIRECTED RNA POLYMERASE 1113 3.3 6 0

Associated Chains for 5-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1smy (C) DNA-directed RNA polymerase beta chain 1119 2.7 7 0.81v1 + 0.14v2 + 0.05v3 + 0.41v5
1zyr (C) DNA-directed RNA polymerase beta chain 1119 3 7 0.84v1 + 0.02v2 + 0.09v3 + 0.13v4 + 0.33v5
1iw7 (C) RNA polymerase beta subunit 1119 2.6 7 0.83v1 + 0.07v2 + 0.06v3 + 0.05v4 + 0.3v5
2a6h (C) DNA-directed RNA polymerase beta chain 1119 2.4 4 1.0v1 + 1.0v5
2be5 (M) DNA-directed RNA polymerase beta chain 1119 2.4 7 1.0v1

Associated Chains for 6-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1l9z (C) RNA POLYMERASE, BETA SUBUNIT 1084 6.5 2 0.04v1 + 0.05v2 + 0.88v3 + (-0.08)v4 + 0.03v5 + 0.25v6
1iw7 (M) RNA polymerase beta subunit 1119 2.6 5 1.0v1 + 1.0v6
2be5 (M) DNA-directed RNA polymerase beta chain 1119 2.4 7 1.0v1

Associated Chains for 7-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
2cw0 (C) DNA-directed RNA polymerase beta chain 1119 3.3 7 0.93v1 + 0.08v3 + 0.04v4 + 0.14v5 + 0.08v6 + 0.62v7
1smy (M) DNA-directed RNA polymerase beta chain 1119 2.7 7 1.0v1 + 1.0v7
2be5 (M) DNA-directed RNA polymerase beta chain 1119 2.4 7 1.0v1