DNA-directed RNA polymerase II 14.2 kDa polyp

Protein Family Details

  Property   Value
 Name DNA-directed RNA polymerase II 14.2 kDa polyp
Family ID 10013_m
First Chain 1r9s (I)
  No of Chains 37
  No of Clusters 3
  No of Rep. Chains 35
  No of Dimensions 2
No of Domain Movements 1

Clusters

Cluster ID Diameter (A) No of Chains Representative Members
1 0.0 1 1r5u(I) 1r5u(I) 
2 0.35 3 1y1v(I) 1pqv(I)  1y1v(I)  1y1y(I) 
3 0.94 33 Extended 1i3q(I)  1i50(I)  1i6h(I)  1k83(I)  1nik(I)  1nt9(I)  1r9s(I)  1r9t(I)  1sfo(I)  1twa(I)  1twc(I)  1twf(I)  1twg(I)  1twh(I)  1wcm(I)  1y1w(I)  1y77(I)  2b63(I)  2b8k(I)  2e2h(I)  2e2i(I)  2e2j(I)  2ja5(I)  2ja6(I)  2ja7(I)  2ja7(U)  2ja8(I)  2nvq(I)  2nvs(I)  2nvt(I)  2nvx(I)  2nvy(I)  2nvz(I) 

Dimensions

Dimension ID Chain 1 Chain 2 Dyndom Run
1 (Vector: v1) 1y1v (I) 1r9s (I) true
2 (Vector: v2) 1r9s (I) 2nvz (I) false

Associated Chains for 1-dimension

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1i50 (I) DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEP 122 2.8 3 0.77v1
1twc (I) DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEP 121 3 3 0.79v1
1twa (I) DNA-directed RNA polymerase II 14.2 kDa polyp 121 3.2 3 0.79v1
1twg (I) DNA-directed RNA polymerase II 14.2 kDa polyp 121 3.3 3 0.78v1
1twh (I) DNA-directed RNA polymerase II 14.2 kDa polyp 121 3.4 3 0.78v1
1k83 (I) DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEP 122 2.8 3 0.83v1
1r9t (I) DNA-directed RNA polymerase II 14.2 kDa polyp 119 3.5 3 0.89v1
1sfo (I) DNA-directed RNA polymerase II 14.2 kDa polyp 119 3.61 3 0.91v1
2nvs (I) DNA-directed RNA polymerase II subunit 9 119 3.4 3 0.71v1
2nvq (I) DNA-directed RNA polymerase II subunit 9 119 2.9 3 0.73v1
2nvt (I) DNA-directed RNA polymerase II subunit 9 119 3.36 3 0.71v1
2e2j (I) DNA-directed RNA polymerase II subunit 9 119 3.5 3 0.74v1
2e2i (I) DNA-directed RNA polymerase II subunit 9 119 3.41 3 0.74v1
1i3q (I) DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEP 122 3.1 3 0.71v1
2nvx (I) DNA-directed RNA polymerase II subunit 9 119 3.6 3 0.79v1
1twf (I) DNA-directed RNA polymerase II 14.2 kDa polyp 122 2.3 3 0.75v1
2b63 (I) DNA-directed RNA polymerase II subunit 9 119 3.8 3 0.61v1
2b8k (I) DNA-directed RNA polymerase II subunit 9 119 4.15 3 0.64v1
1i6h (I) DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEP 119 3.3 3 1.0v1
1nt9 (I) DNA-directed RNA polymerase II 14.2 kDa polyp 119 4.2 3 1.0v1
1nik (I) DNA-directed RNA polymerase II, chain RPB9 119 4.1 3 1.0v1
1y1w (I) DNA-directed RNA polymerase II subunit 9 119 4 3 0.69v1
1y77 (I) DNA-directed RNA polymerase II subunit 9 119 4.5 3 0.69v1
1wcm (I) DNA-DIRECTED RNA POLYMERASE II 14.2 KDA POLYP 119 3.8 3 0.69v1
2ja7 (I) DNA-DIRECTED RNA POLYMERASE II SUBUNIT 9 116 3.8 3 0.68v1
2ja6 (I) DNA-DIRECTED RNA POLYMERASE II SUBUNIT 9 116 4 3 0.68v1
2ja7 (U) DNA-DIRECTED RNA POLYMERASE II SUBUNIT 9 116 3.8 3 0.68v1
2ja5 (I) DNA-DIRECTED RNA POLYMERASE II SUBUNIT 9 116 3.8 3 0.68v1
2ja8 (I) DNA-DIRECTED RNA POLYMERASE II SUBUNIT 9 116 3.8 3 0.67v1
2nvy (I) DNA-directed RNA polymerase II subunit 9 122 3.4 3 0.87v1
1r9s (I) DNA-directed RNA polymerase II 14.2 kDa polyp 119 4.25 3 1.0v1
1y1v (I) DNA-directed RNA polymerase II subunit 9 119 3.8 2 0

Associated Chains for 2-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1r5u (I) DNA-directed RNA polymerase II 14.2 kDa polyp 118 4.5 1 0.8v1 + 0.63v2
2e2h (I) DNA-directed RNA polymerase II subunit 9 119 3.95 3 0.97v1 + 0.94v2
2nvz (I) DNA-directed RNA polymerase II subunit 9 119 4.3 3 1.0v1 + 1.0v2
1r9s (I) DNA-directed RNA polymerase II 14.2 kDa polyp 119 4.25 3 1.0v1