Protein Domain Movement Analysis
Home
Run Programs
DynDom
DynDom 3D
Domain Select
Databases
User-Created Database
Non-Redundant Database
Domain Movement Classification "Hinge and Shear"
Domain Movement Classification using Dynamic Contact Graphs
Ligand-Induced Domain Movement Database
Papers
Methods
Databases
Applications
Links
Download
Login
ABC transporter, periplasmic substrate-bindin
Protein Family Details
Property
Value
Name
ABC transporter, periplasmic substrate-bindin
Family ID
5216_m
First Chain
1twy (D)
No of Chains
8
No of Clusters
3
No of Rep. Chains
3
No of Dimensions
1
No of Domain Movements
1
Clusters
Cluster ID
Diameter (A)
No of Chains
Representative
Members
1
0.0
1
1twy(C)
1twy(C) 
2
0.31
4
1twy(D)
1twy(A)  1twy(D)  1twy(E)  1twy(H) 
3
0.46
3
1twy(G)
1twy(B)  1twy(F)  1twy(G) 
Dimensions
Dimension ID
Chain 1
Chain 2
Dyndom Run
1 (Vector:
v
1
)
1twy (D)
1twy (G)
true
Associated Chains for 1-dimension
Chain ID
Protein Name
Sequence Length
Resolution
Cluster ID
Projection
1twy (C)
ABC transporter, periplasmic substrate-bindin
243
1.65
1
0.6
v
1
1twy (D)
ABC transporter, periplasmic substrate-bindin
243
1.65
2
0
1twy (G)
ABC transporter, periplasmic substrate-bindin
243
1.65
3
1.0
v
1