Atp-Dependent RNA Helicase Ddx3x

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-410   THR-411  4.2 4.1 15.5 24.3 24.4 41.8 203.7
 THR-411   SER-412  5.5 6.2 -7.4 -15.2 70.1 76.2 32.4
 SER-412   GLU-413  8.0 8.1 -171.4 90.7 59.2 63.0 150.4

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees