Citrate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-56   VAL-57  6.1 6.6 17.8 -8.6 78.0 78.5 30.1
 VAL-57   LEU-58  4.0 4.5 3.4 -26.6 130.5 132.5 61.0
 LEU-58   ASP-59  4.1 4.4 10.8 -4.8 60.4 66.3 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-62   GLY-63  6.2 6.0 -48.5 17.5 122.0 124.5 -76.3
 GLY-63   ILE-64  3.3 3.1 -23.2 33.8 59.2 57.2 28.8
 ILE-64   ARG-65  0.4 1.1 -3.2 -16.4 61.9 55.8 74.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-285   THR-286  5.3 6.1 -6.4 14.3 17.2 16.7 -43.6
 THR-286   GLN-287  4.9 6.4 6.8 -8.2 132.8 130.0 -1.3
 GLN-287   LEU-288  8.2 9.6 5.5 2.0 92.3 101.5 7.6
 LEU-288   GLN-289  8.6 9.0 -16.2 -3.3 124.2 144.6 -9.8
 LEU-288   GLN-289  8.6 9.0 -16.2 -3.3 124.2 144.6 -9.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-288   GLN-289  8.6 9.0 -16.2 -3.3 124.2 144.6 -9.8
 LEU-288   GLN-289  8.6 9.0 -16.2 -3.3 124.2 144.6 -9.8
 GLN-289   LYS-290  5.7 6.2 -2.6 19.2 162.9 154.3 56.8
 LYS-290   GLU-291  7.1 7.8 12.5 -20.5 82.8 66.3 11.2
 VAL-292   GLY-293  11.5 8.8 81.3 -176.5 67.0 82.6 -324.8
 GLY-293   LYS-294  9.1 11.4 7.4 -56.3 117.9 127.0 -42.3
 LYS-294   ASP-295  8.1 15.0 -113.4 46.6 49.1 26.0 264.3
 ASP-295   VAL-296  11.5 15.8 -122.5 22.4 83.3 97.1 200.4
 VAL-296   SER-297  13.5 18.3 156.6 13.0 124.7 68.3 -594.9
 LEU-301   ARG-302  15.0 13.7 -7.6 -19.7 45.6 48.3 173.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-327   PRO-328  4.5 4.0 6.0 -4.5 78.7 84.6 21.9
 PRO-328   ARG-329  4.8 3.5 0.8 20.3 47.1 56.0 39.9
 ARG-329   TYR-330  2.9 1.5 -21.0 4.0 164.9 161.0 -78.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-348   LEU-349  9.0 7.4 -4.1 -2.3 95.7 91.6 12.7
 LEU-349   VAL-350  7.2 6.1 6.4 -2.9 16.3 19.3 -24.2
 VAL-350   ALA-351  6.1 5.0 14.7 -2.6 59.3 59.6 65.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-371   PRO-372  10.2 10.4 1.0 3.4 70.5 73.5 -19.0
 PRO-372   ASN-373  7.0 7.2 -6.1 -31.2 55.6 43.2 82.1
 ASN-373   VAL-374  4.2 5.2 -29.4 43.9 94.0 117.8 -38.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees