Aspartate Carbamoyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aspartate Carbamoyltransferase
  Conformer 1
(PDB)
1gq3 (C)
  Conformer 2
(PDB)
1gq3 (B)
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 138 1.43   8 - 142   291 - 300
2 133 0.4   143 - 290

Sequence


           ________________________________________________________________________________________________________________________ 
 1gq3(C) : NPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMAHPQEGAARLATEFSGN 
         :                                                                                                                          
 1gq3(B) : NPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSl-------ADTISVISTYVDAIVMAHPQEGAARLATEFSGN 
           ________________________________________________________________________________________________________________________ 

           _________________141____________________________________________________________________________________________________ 
 1gq3(C) : VPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYA 
         :                                                                                                                          
 1gq3(B) : VPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQ---------- 
           _________________141____________________________________________________________________________________________________ 

           ______________________________________________290___________________                                                     
 1gq3(C) : NVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLV                                                     
         :                                                                                                                          
 1gq3(B) : -----fVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR***                                                     
           ______________________________________________290___________________                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.3
Translation
(A)
-0.5
Closure
(%)
94.2
Bending Residues
( green )
  141 - 143
  290 - 291
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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