Cannabinoid Receptor 1,Glga Glycogen Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cannabinoid Receptor 1,Glga Glycogen Synthase
  Conformer 1
(PDB)
5u09 (A)
  Conformer 2
(PDB)
7fee (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 261 2.03   111 - 1001   342 - 410
2 204 0.98   1002 - 341

Sequence


           ________________________________________________________________________________________________________________________ 
 5u09(A) : ***ENFMDIECFMVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYI 
         :                                                                                                                          
 7fee(A) : QCGENFMDIECFMVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTAKVGSLFLAAIDRYI 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________________________301___________________________________ 
 5u09(A) : SIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWKA----GIDCSFWNESYLTGSRDERKKSLLSKFGMDE 
         :                                                                                                                          
 7fee(A) : SIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAGIDCSFWNESYLTGSRDERKKSLLSKFGMDE 
           __________________________________________________________________________________301___________________________________ 

           ________________________________________________________________________________________________________________________ 
 5u09(A) : GVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT 
         :                                                                                                                          
 7fee(A) : GVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________336_______________________________________________________________________ 
 5u09(A) : NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSDQARMDIRLAKTLVLILVVLIICWGPLLAIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHA 
         :                                                                                                                          
 7fee(A) : NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSDQARMDIELAKTLVLILVVLIICWGPLLAIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVDPIIYALRSKDLRHA 
           ______________________________________________336_______________________________________________________________________ 

           ______                                                                                                                   
 5u09(A) : FRSMF*                                                                                                                   
         :                                                                                                                          
 7fee(A) : FRSMFP                                                                                                                   
           ______                                                                                                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
58.1
Translation
(A)
-0.1
Closure
(%)
34.3
Bending Residues
( green )
  301 - 1004
  336 - 343
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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