Cop9 Signalosome Complex Subunit 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cop9 Signalosome Complex Subunit 2
  Conformer 1
(PDB)
4d10 (B)
  Conformer 2
(PDB)
4d10 (J)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 310 0.27   32 - 352
2 89 0.23   353 - 441

Sequence


           ________________________________________________________________________________________________________________________ 
 4d10(B) : VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWF 
         :                                                                                                                          
 4d10(J) : VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWF 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 4d10(B) : KTNTKLGKLYLEREEYGKLQKILRQLHQSCQtQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYL 
         :                                                                                                                          
 4d10(J) : KTNTKLGKLYLEREEYGKLQKILRQLHQSCQtQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYL 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________________________350__________________________________________________ 
 4d10(B) : VLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHG 
         :                                                                                                                          
 4d10(J) : VLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHG 
           ___________________________________________________________________350__________________________________________________ 

           ___________________________________________                                                                              
 4d10(B) : RIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA                                                                              
         :                                                                                                                          
 4d10(J) : RIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA                                                                              
           ___________________________________________                                                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
3.8
Translation
(A)
0.1
Closure
(%)
98.4
Bending Residues
( green )
  350 - 355
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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