Crotonobetainyl-Coa:carnitine Coa-Transferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Crotonobetainyl-Coa:carnitine Coa-Transferase
  Conformer 1
(PDB)
1xk7 (A)
  Conformer 2
(PDB)
1xk6 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 288 0.22   7 - 219   226 - 229   321 - 403
2 94 0.18   220 - 224   230 - 320

Sequence


           ________________________________________________________________________________________________________________________ 
 1xk7(A) : SHdHLPpKFGPLAGLRVVFSGIEIAGPFAGQfAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLeTTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAH 
         :                                                                                                                          
 1xk6(A) : ****LPpKFGPLAGLRVVFSGIEIAGPFAGQfAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLeTTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAH 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________219_224_229_____________________ 
 1xk7(A) : LSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPpAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAyEVlRgQYFdYFNGGEcPRsKGKDPYYAGCGLYKCADGYIVeLV 
         :                                                                                                                          
 1xk6(A) : LSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPpAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAyEVlRgQYFdYFNGGEcPRsKGKDPYYAGCGLYKCADGYIVeLV 
           ________________________________________________________________________________________219_224_229_____________________ 

           __________________________________________________________________320___________________________________________________ 
 1xk7(A) : GITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTdGRTCKGPNIpKFKNNPGQIWRGpSH 
         :                                                                                                                          
 1xk6(A) : GITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTdGRTCKGPNIpKFKNNPGQIWRGpSH 
           __________________________________________________________________320___________________________________________________ 

           ______________________________                                                                                           
 1xk7(A) : GdTAAILKNIGYSENDIQELVSKGLAKVED                                                                                           
         :                                                                                                                          
 1xk6(A) : GdTAAILKNIGYSENDIQELVSKGLAKVED                                                                                           
           ______________________________                                                                                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
2.1
Translation
(A)
0.0
Closure
(%)
97.2
Bending Residues
( green )
  219 - 220
  224 - 226
  229 - 230
  320 - 321
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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