3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase Arog

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase Arog
  Conformer 1
(PDB)
2b7o (A)
  Conformer 2
(PDB)
2b7o (B)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 406 0.46   25 - 457
2 21 2.59   4 - 24

Sequence


           _______________________24_______________________________________________________________________________________________ 
 2b7o(A) : GAnWTVDIPIDQLPSLPPLPTDLRTRLDAALAKPAAQQPTWPADQALArTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFdNTEPHIRGNVRALLQaVVLTYGASpVVK 
         :                                                                                                                          
 2b7o(B) : GAnWTVDIPIDQLPSLPPLPTDLRTRLDAALAKPAAQQPTWPADQALArTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFdNTEPHIRGNVRALLQaVVLTYGASpVVK 
           _______________________24_______________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2b7o(A) : VARIAGQYAKPRSADIDALGLRSYRGDiNGFAPDAAAREHDPSRLVRAYANASAAnLVRALTSSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFsACGVADRNLQTAEIYAS 
         :                                                                                                                          
 2b7o(B) : VARIAGQYAKPRSADIDALGLRSYRGDiNGFAPDAAAREHDPSRLVRAYANASAAnLVRALTSSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFsACGVADRNLQTAEIYAS 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2b7o(A) : HEALVLDYERAlRLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNtPELAVEYVERLDPHNKPGRLTLVSRgNHKVRDLLPPIVEKVQATGHQVIWQCDPhG 
         :                                                                                                                          
 2b7o(B) : HEALVLDYERAlRLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNtPELAVEYVERLDPHNKPGRLTLVSRgNHKVRDLLPPIVEKVQATGHQVIWQCDPhG 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________                                        
 2b7o(A) : NTHESSTGFKTRHFDRIVDEVQGFFEVHRALGTHPGGIHVEITGENVT---lAGRYETACDPRLNTQQSLELAFLVAElRD                                        
         :                                                                                                                          
 2b7o(B) : NTHES---fKTRHFDRIVDEVQGFFEVHRALGTHPGGIHVEITGENVTECLlAGRYETACDPRLNTQQSLELAFLVAElRD                                        
           _________________________________________________________________________________                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.3
Translation
(A)
-1.1
Closure
(%)
93.5
Bending Residues
( green )
  24 - 29
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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