Glyoxylate Reductase/hydroxypyruvate Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glyoxylate Reductase/hydroxypyruvate Reductase
  Conformer 1
(PDB)
2h1s (C)
  Conformer 2
(PDB)
2gcg (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 193 0.27   103 - 296
2 118 0.48   10 - 102   297 - 324

Sequence


           ______________________________________________________________________________________________102_______________________ 
 2h1s(C) : *LkVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVIST-sVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRR 
         :                                                                                                                          
 2gcg(B) : LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRR 
           ______________________________________________________________________________________________102_______________________ 

           ________________________________________________________________________________________________________________________ 
 2h1s(C) : LPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQK-kETAVFINISR 
         :                                                                                                                          
 2gcg(B) : LPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISR 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________296________________________________                                      
 2h1s(C) : GDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNT-sLLAANNLLAGLRGEP-pSEL**                                      
         :                                                                                                                          
 2gcg(B) : GDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSELKL                                      
           ________________________________________________296________________________________                                      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.7
Translation
(A)
-0.3
Closure
(%)
89.0
Bending Residues
( green )
  102 - 103
  296 - 297
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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