Alcohol Dehydrogenase, Iron-Containing

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alcohol Dehydrogenase, Iron-Containing
  Conformer 1
(PDB)
1o2d (B)
  Conformer 2
(PDB)
1o2d (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 262 0.23   3 - 197   203 - 252   258 - 264   266 - 266   268 - 273   312 - 318   336 - 339
2 81 0.26   198 - 202   253 - 257   265 - 265   267 - 267   274 - 311   319 - 335   340 - 356

Sequence


           ________________________________________________________________________________________________________________________ 
 1o2d(B) : HHVWEFYpTDVFFGEKILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVkAVERYRNDSFDFVVGLGGGSPdFAKAVAVLLKEKDLSVEDLYD 
         :                                                                                                                          
 1o2d(A) : **VWEFYpTDVFFGEKILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVkAVERYRNDSFDFVVGLGGGSPdFAKAVAVLLKEKDLSVEDLYD 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________197__202_________________________________________ 
 1o2d(B) : REKVKHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGCTLfPVYAFLDPRYTYSsDELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAkIIHRNLPKAIEGNREARKKfVASCLAGv 
         :                                                                                                                          
 1o2d(A) : REKVKHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGCTLfPVYAFLDPRYTYSsDELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAkIIHRNLPKAIEGNREARKKfVASCLAGv 
           _______________________________________________________________________197__202_________________________________________ 

           ___252__257____264______273________________________________311____318______________335_339____________________           
 1o2d(B) : IAQTGTTLAHALGYPLTTEKGIKHGKATGvLPFVeVkEEIPEKVDTVNHIFGGSLLKFLKELGLYEKVAVSSEELEKWVEKGSRAKHLKNTPGTFTPEKIRNIYREALG*           
         :                                                                                                                          
 1o2d(A) : IAQTGTTLAHALGYPLTTEKGIKHGKATGvLPFVeVkEEIPEKVDTVNHIFGGSLLKFLKELGLYEKVAVSSEELEKWVEKGSRAKHLKNTPGTFTPEKIRNIYREALGV           
           ___252__257____264______273________________________________311____318______________335_339____________________           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
2.0
Translation
(A)
-0.1
Closure
(%)
100.0
Bending Residues
( green )
  197 - 198
  202 - 203
  252 - 253
  257 - 258
  264 - 268
  273 - 274
  311 - 312
  318 - 321
  335 - 336
  339 - 340
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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