Allantoate Amidohydrolase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Allantoate Amidohydrolase
  Conformer 1
(PDB)
2imo (B)
  Conformer 2
(PDB)
1z2l (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 257 0.71   8 - 212   331 - 407
2 113 0.48   213 - 330

Sequence


           ________________________________________________________________________________________________________________________ 
 2imo(B) : LITHFRQAIEETLPWLSSFGADPAGG-tRLLYSPEWLETQQQFKKR-aASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEV 
         :                                                                                                                          
 1z2l(A) : LITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEV 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________212______________________________ 
 2imo(B) : VA-aEEEGSRFPYVFWGSKNIFGLANP------------------kACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTP-gYRRDTVY 
         :                                                                                                                          
 1z2l(A) : VAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVY 
           _______________________________________________________________________________________212______________________________ 

           __________________________________________________________________________________327___________________________________ 
 2imo(B) : AFSRICHQSVEKAKR-gDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLEND-rAICDE-dIGIDIDLW-dEEPVP-nKELVATLTELCEREKLNYRV-hSGAGHDA 
         :                                                                                                                          
 1z2l(A) : AFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDA 
           __________________________________________________________________________________327___________________________________ 

           ___________________________________________________                                                                      
 2imo(B) : QIFAPRVPTC-iFIPSINGISHNPAERTNITDLAEGVKTLAL-lYQLAWQK                                                                      
         :                                                                                                                          
 1z2l(A) : QIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK                                                                      
           ___________________________________________________                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.6
Translation
(A)
-0.5
Closure
(%)
10.4
Bending Residues
( green )
  212 - 213
  327 - 331
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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