Alpha1,3-Fucosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alpha1,3-Fucosyltransferase
  Conformer 1
(PDB) 		2nzx (B)
  Conformer 2
(PDB) 		2nzx (C)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 308 0.8   6 - 27   48 - 343
2 20 0.92   28 - 47

Sequence


           _____________________23______________________47_________________________________________________________________________ 
 2nzx(B) : MFQPLLDAYVESASIEKMASKSPPPLKIAVANWWGDEEIKEFKNSVLYFILSQRYTITLHQNPNEFSDLVFGNP----------qNAKRVFYTGENESPNFNLFDYAIGFDELDFNDRYL 
         :                                                                                                                          
 2nzx(C) : MFQPLLDAYVESASIEKMASKSPPPLKIAVANWWGDEEIKEFKNSVLYFILSQRYTITLHQNPNEFSDLVFGNPLGSARKILSYQNAKRVFYTGENESPNFNLFDYAIGFDELDFNDRYL 
           _____________________23______________________47_________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2nzx(B) : RMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFEN 
         :                                                                                                                          
 2nzx(C) : RMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFEN 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________________________________           
 2nzx(B) : TQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDN**           
         :                                                                                                                          
 2nzx(C) : TQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDNPF           
           ______________________________________________________________________________________________________________           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		20.2
Translation
(A) 		-0.5
Closure
(%) 		6.4
Bending Residues
( green ) 		  23 - 29
  47 - 48
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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