Anthranilate Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anthranilate Phosphoribosyltransferase
  Conformer 1
(PDB) 		1khd (D)
  Conformer 2
(PDB) 		1khd (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 230 0.47   68 - 68   70 - 75   79 - 119   121 - 121   132 - 161   190 - 342
2 92 0.84   14 - 67   69 - 69   76 - 78   120 - 120   122 - 131   162 - 189

Sequence


           ______________________________________________________67______75_78______________________________________119____________ 
 1khd(D) : THQPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDG--sINISTASAFVAASCGAKVAKHGNRSqPLAGSC 
         :                                                                                                                          
 1khd(B) : THQPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNR---lAGSC 
           ______________________________________________________67______75_78______________________________________119____________ 

           _________________________161_________________________189________________________________________________________________ 
 1khd(D) : DLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELNNGE 
         :                                                                                                                          
 1khd(B) : DLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELNNGE 
           _________________________161_________________________189________________________________________________________________ 

           ___________________________________________________________________________________________                              
 1khd(D) : IESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQDNLRHNAQLALETIRSGTAFERVTALAAR                              
         :                                                                                                                          
 1khd(B) : IESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQDNLRHNAQLALETIRSGTAFERVTALAAR                              
           ___________________________________________________________________________________________                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		6.8
Translation
(A) 		0.2
Closure
(%) 		20.4
Bending Residues
( green ) 		  67 - 70
  75 - 76
  78 - 79
  119 - 132
  161 - 162
  189 - 190
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download