Anthranilate Phosphoribosyltransferase 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anthranilate Phosphoribosyltransferase 2
  Conformer 1
(PDB)
1vqu (A)
  Conformer 2
(PDB)
1vqu (B)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 237 0.67   76 - 174   203 - 358
2 81 0.39   18 - 75   175 - 202

Sequence


           ___________________________________________________________75___________________________________________________________ 
 1vqu(A) : TSWYLLLQQLIDGESLSRSQAAELqGWLSEAVPPELSGAILTALNFKGVSADELTGaEVLQSQSKtNSPFSIIDTCGTGsSTFNISTAVAFVAAAYGVPVAKHGNRS-sLTGSADVLEAL 
         :                                                                                                                          
 1vqu(B) : *SWYLLLQQLIDGESLSRSQAAELqGWLSEAVPPELSGAILTALNFKGVSADELTGaEVLQSQSK-nSPFSIIDTCGTGsSTFNISTAVAFVAAAYGVPVAKHGNRSASlTGSADVLEAL 
           ___________________________________________________________75___________________________________________________________ 

           __________________171__________________________200______________________________________________________________________ 
 1vqu(A) : GVNLGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNLGKQKAIVLHGRERLDEAGLGDLTDLAVLSDGELQLTT 
         :                                                                                                                          
 1vqu(B) : GVNLGASPEKVQAALQEVGITFLFAP---pALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNLGKQKAIVLHGRERLDEAGLGDLTDLAVLSDGELQLTT 
           __________________171__________________________200______________________________________________________________________ 

           ____________________________________________________________________________________________                             
 1vqu(A) : INPQEVGVTPAPIGALRGGDVQENAEILKAVLQGKGTQAQQDAVALNAALALQVAGAVPLLDHAQGVSVAKEILQTGTAWAKLAQLVYFLGN                             
         :                                                                                                                          
 1vqu(B) : INPQEVGVTPAPIGALRGGDVQENAEILKAVLQGKGTQAQQDAVALNAALALQVAGAVPLLDHAQGVSVAKEILQTGTAWAKLAQLVYFLGN                             
           ____________________________________________________________________________________________                             

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.6
Translation
(A)
-0.2
Closure
(%)
10.7
Bending Residues
( green )
  75 - 76
  171 - 183
  200 - 203
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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