Anti-Cleavage Anti-Grea Transcription Factor Gfh1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anti-Cleavage Anti-Grea Transcription Factor Gfh1
  Conformer 1
(PDB)
2etn (B)
  Conformer 2
(PDB)
2eul (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 78 1.32   4 - 79   134 - 135
2 73 0.66   80 - 133   136 - 154

Sequence


           _____________________________________________________________________________79_________________________________________ 
 2etn(B) : *AREVKLTKAGYERLMKQLEQERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEARIDSLEDVLSRAVILEEGTGEVIGLGSVVELEDPATGERLSVQVVSPAEASVLENPMKIS 
         :                                                                                                                          
 2eul(D) : MAREVKLTKAGYERLMQQLERERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEARIDSLEDILSRAVILEEGSGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMKIS 
           _____________________________________________________________________________79_________________________________________ 

           __________133_______________________                                                                                     
 2etn(B) : DASPMGKALLGHRVGDVLSLDTPKGKKEFRVVAIHG                                                                                     
         :                                                                                                                          
 2eul(D) : DASPMGKALLGHRVGDVLSLDTPKGRREFRVVAIHG                                                                                     
           __________133_______________________                                                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
15.8
Translation
(A)
0.1
Closure
(%)
99.1
Bending Residues
( green )
  79 - 80
  133 - 136
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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