Anti-Sigma F Factor Antagonist

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anti-Sigma F Factor Antagonist
  Conformer 1
(PDB)
1h4x (B)
  Conformer 2
(PDB)
1h4y (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 81 1.3   4 - 79   103 - 108
2 23 0.56   80 - 102

Sequence


           ____________________________________________________________________________79____________________102______________      
 1h4x(B) : AFQLEMVTRETVVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNFERLSFMDs-GVGLVLGRMRELEAVAGRTILLNPSPTMRKVFQFSGLGPWMMDATEEEAIDRVR****      
         :                                                                                                                          
 1h4y(B) : AFQLEMVTRETVVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTILLNPSPTVRKVFQFSGLGPWMMDATEEEAIDRVRGIVN      
           ____________________________________________________________________________79____________________102______________      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
17.6
Translation
(A)
-0.4
Closure
(%)
8.8
Bending Residues
( green )
  79 - 80
  102 - 103
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

Download and extract PyMOL PML script file Download