Apolipoprotein A-II

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Apolipoprotein A-II
  Conformer 1
(PDB) 		1l6l (P)
  Conformer 2
(PDB) 		1l6l (1)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 32 1.66   40 - 71
2 30 2.85   8 - 39

Sequence


           __________________________________37________________________________________                                             
 1l6l(P) : AKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAE-kSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPA**                                             
         :                                                                                                                          
 1l6l(1) : **EPCVESL-sQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ                                             
           __________________________________37________________________________________                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		43.7
Translation
(A) 		-3.4
Closure
(%) 		16.9
Bending Residues
( green ) 		  37 - 41
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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