Atrial Natriuretic Peptide Clearance Receptor

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Atrial Natriuretic Peptide Clearance Receptor
  Conformer 1
(PDB)
1jdn (A)
  Conformer 2
(PDB)
1jdp (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 217 1.13   7 - 140   279 - 368
2 169 2.04   141 - 278   369 - 399

Sequence


           ________________________________________________________________________________________________________________________ 
 1jdn(A) : ****PQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEG--lPPGTRFQVAYEDSDCGNRALFSLVDRVAAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSE 
         :                                                                                                                          
 1jdp(A) : EALPPQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEGrLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSE 
           ________________________________________________________________________________________________________________________ 

           ____________140_________________________________________________________________________________________________________ 
 1jdn(A) : YSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIE 
         :                                                                                                                          
 1jdp(A) : YSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIE 
           ____________140_________________________________________________________________________________________________________ 

           ______________________________278_______________________________________________________________________________________ 
 1jdn(A) : LFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANG 
         :                                                                                                                          
 1jdp(A) : LFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANG 
           ______________________________278_______________________________________________________________________________________ 

           368__________________________________________________                                                                    
 1jdn(A) : DRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENR                                                                    
         :                                                                                                                          
 1jdp(A) : DRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMRP*****************                                                                    
           368__________________________________________________                                                                    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
15.9
Translation
(A)
-0.4
Closure
(%)
91.0
Bending Residues
( green )
  140 - 141
  278 - 283
  368 - 369
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download