Beta-Carbonic Anhydrase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Beta-Carbonic Anhydrase
  Conformer 1
(PDB)
1g5c (A)
  Conformer 2
(PDB)
1g5c (E)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 126 0.98   6 - 94   130 - 166
2 21 1.49   95 - 115

Sequence


           ______________________________________________________________________________________89_______________________115______ 
 1g5c(A) : IIKDILRENQDFRFRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVDDGVIRSAAVAIYALGDNEIIIVGHTDCGMARLDEDLIVSRMRELGVEEEVIENFSIDV 
         :                                                                                                                          
 1g5c(E) : IIKDILRENQDFRFRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVDDGVIRSAAVAIYALGDNEIIIVGHTDCGMARLDEDLIVSRMRELGVEEEVIENFSIDV 
           ______________________________________________________________________________________89_______________________115______ 

           _________________________________________________                                                                        
 1g5c(A) : LNPVGDEEENVIEGVKRLKSSPLIPESIGVHGLIIDINTGRLKPLYLDE                                                                        
         :                                                                                                                          
 1g5c(E) : LNPVGDEEENVIEGVKRLKSSPLIPESIGVHGLIIDINTGRLKPLYLDE                                                                        
           _________________________________________________                                                                        

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
30.4
Translation
(A)
-1.8
Closure
(%)
99.8
Bending Residues
( green )
  89 - 95
  115 - 130
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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