Beta-Catenin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Beta-Catenin
  Conformer 1
(PDB)
1jpp (B)
  Conformer 2
(PDB)
1g3j (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 246 1.14   156 - 315   327 - 344   359 - 360   362 - 392   424 - 451   466 - 466   468 - 473
2 245 1.64   316 - 326   345 - 358   361 - 361   393 - 423   452 - 465   467 - 467   474 - 658

Sequence


           ________________________________________________________________________________________________________________________ 
 1jpp(B) : ****************TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLF 
         :                                                                                                                          
 1g3j(A) : HAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLF 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________________315________326_______________344___________358_______________ 
 1jpp(B) : YAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP 
         :                                                                                                                          
 1g3j(A) : YAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP 
           ___________________________________________________________315________326_______________344___________358_______________ 

           _______________391_____________________________423_________________________451___________465_____473____________________ 
 1jpp(B) : SQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 
         :                                                                                                                          
 1g3j(A) : SQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 
           _______________391_____________________________423_________________________451___________465_____473____________________ 

           ________________________________________________________________________________________________________________________ 
 1jpp(B) : VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQ---qQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA 
         :                                                                                                                          
 1g3j(A) : VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRfVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA 
           ________________________________________________________________________________________________________________________ 

           __________________________________________                                                                               
 1jpp(B) : QDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS*                                                                               
         :                                                                                                                          
 1g3j(A) : QDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSE                                                                               
           __________________________________________                                                                               

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.0
Translation
(A)
-1.6
Closure
(%)
59.3
Bending Residues
( green )
  315 - 316
  326 - 327
  344 - 345
  358 - 362
  391 - 393
  423 - 424
  451 - 452
  465 - 468
  473 - 474
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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